ms_log Member List

This is the complete list of members for ms_log, including all inherited members.

addToCatalog(const msg_catalog_t catalog[], size_t numEntries, ms_loggingmonitor::Source_e src, errorOrLogMessages_e errorOrLogMessages)	ms_log
getLoggingLevel() const =0	ms_log	pure virtual
getMessageSource(const ms_log::msg_num_t msgNum) const	ms_log
LOGMSG_AAHELPER_CALC_MASS_MAX_REACHED	ms_log	static
LOGMSG_AAHELPER_CALC_MASS_SKIP_D_PRIME_RES	ms_log	static
LOGMSG_AAHELPER_CALC_MASS_SKIP_D_RESIDUE	ms_log	static
LOGMSG_AAHELPER_CALC_MASS_SKIP_V_RESIDUE	ms_log	static
LOGMSG_AAHELPER_CALC_MASS_SKIP_W_PRIME_RES	ms_log	static
LOGMSG_AAHELPER_CALC_MASS_SKIP_W_RESIDUE	ms_log	static
LOGMSG_AAHELPER_CFR_INIT_VARMOD_IS_LINKER	ms_log	static
LOGMSG_AAHELPER_CFR_INIT_VARMOD_IS_MONOLINK	ms_log	static
LOGMSG_AAHELPER_CFR_LOOPLINKING_MASK	ms_log	static
LOGMSG_AAHELPER_CFR_MASSES_VALUE	ms_log	static
LOGMSG_AAHELPER_CFR_MOD_DELTA_AT_SITE	ms_log	static
LOGMSG_AAHELPER_CFR_NUM_FRAGMENTS	ms_log	static
LOGMSG_AAHELPER_CFR_SET_QUANT_COMPONENT	ms_log	static
LOGMSG_AAHELPER_CFR_START_FRAGMENTS	ms_log	static
LOGMSG_AAHELPER_CROSSLINKED_END	ms_log	static
LOGMSG_AAHELPER_CROSSLINKED_START	ms_log	static
LOGMSG_AAHELPER_CUMULATIVE_MASS_NL	ms_log	static
LOGMSG_AAHELPER_ETMOD_LOOKUP	ms_log	static
LOGMSG_AAHELPER_IMMONIUM_ION_ADD	ms_log	static
LOGMSG_AAHELPER_IMMONIUM_ION_REJECT	ms_log	static
LOGMSG_AAHELPER_INTERNAL_ION_ADD	ms_log	static
LOGMSG_AAHELPER_INTERNAL_ION_REJECT	ms_log	static
LOGMSG_AAHELPER_MASTER_NL_VALS	ms_log	static
LOGMSG_AAHELPER_MULTINL_INDICES	ms_log	static
LOGMSG_AAHELPER_REGULAR_ION_ADD	ms_log	static
LOGMSG_AAHELPER_REGULAR_ION_REJECT	ms_log	static
LOGMSG_AAHELPER_REGULAR_PRIME_ION_ADD	ms_log	static
LOGMSG_AAHELPER_REGULAR_PRIME_ION_REJECT	ms_log	static
LOGMSG_AAHELPER_SERIES_PARAMS	ms_log	static
LOGMSG_AAHELPER_SETUP_FROM_PRE2_2_ANYCHNG	ms_log	static
LOGMSG_AAHELPER_SETUP_FROM_PRE2_2_INIT	ms_log	static
LOGMSG_AAHELPER_TOTAL_NL_VALS	ms_log	static
LOGMSG_CUSTQUANT_ADD_QUANT_KEY	ms_log	static
LOGMSG_CUSTQUANT_REMOVE_ALL_KEY	ms_log	static
LOGMSG_CUSTQUANT_REMOVE_KEY	ms_log	static
LOGMSG_DBG1_NUM_PROCESSOR_GROUPS	ms_log	static
LOGMSG_DBG2_CPU_INF_CORE_PER_PHYS	ms_log	static
LOGMSG_DBG2_CPU_INF_GETAUTODETECT	ms_log	static
LOGMSG_DBG2_CPU_INF_LOGI_PER_PHYS	ms_log	static
LOGMSG_DBG2_CPU_INF_MT_NAME	ms_log	static
LOGMSG_DBG2_CPU_INF_MT_STATUS	ms_log	static
LOGMSG_DBG2_CPU_INF_NAME	ms_log	static
LOGMSG_DBG2_CPU_INF_NUM_AVAIL	ms_log	static
LOGMSG_DBG2_CPU_INF_NUM_GROUPS	ms_log	static
LOGMSG_DBG2_CPU_INF_NUM_ON_SYS	ms_log	static
LOGMSG_DBG2_CPU_INF_NUM_PHYSICAL	ms_log	static
LOGMSG_DBG2_CPU_INF_PROC_AFFINITY	ms_log	static
LOGMSG_DBG2_CPU_INF_TABLE_LINE	ms_log	static
LOGMSG_DBG2_CPU_INF_TABLE_TITLE	ms_log	static
LOGMSG_DBG2_CPU_INF_USE_PROCESSES	ms_log	static
LOGMSG_DBG2_NUM_CONFIG_MISMATCH	ms_log	static
LOGMSG_DBG2_NUM_ONLINE_MISMATCH	ms_log	static
LOGMSG_DBG3_AUTO_DETECT_NUM_THREAD	ms_log	static
LOGMSG_DBG3_BINDING_PROCESSORS	ms_log	static
LOGMSG_DBG3_BINDING_THREAD	ms_log	static
LOGMSG_DBG3_CALL_GET_CHIP_MFCTR	ms_log	static
LOGMSG_DBG3_HWLOC_GROUPS	ms_log	static
LOGMSG_DBG3_HWLOC_TREE	ms_log	static
LOGMSG_DBG3_PROCESSOR_NAME	ms_log	static
LOGMSG_GET_THR_LOOP_BODY_MIN_FOUND	ms_log	static
LOGMSG_GET_THR_LOOP_BODY_START	ms_log	static
LOGMSG_GET_THR_LOOP_BODY_ZERO_COUNT	ms_log	static
LOGMSG_GET_THR_REACH_COND	ms_log	static
LOGMSG_GET_THRESHOLD_FOR_FDR_FOR_ET	ms_log	static
LOGMSG_GET_THRESHOLD_FOR_FIRST_PASS_FDR	ms_log	static
LOGMSG_HTTP_GETRETURNSTRING	ms_log	static
LOGMSG_HTTP_MAXCONECTIONS10FAILED	ms_log	static
LOGMSG_HTTP_MAXCONECTIONSFAILED	ms_log	static
LOGMSG_HTTP_QUERYSTATUSRESULT	ms_log	static
LOGMSG_HTTP_URLSTRING	ms_log	static
LOGMSG_INST_ADDINGDATABASE	ms_log	static
LOGMSG_INST_ADDOPTIONSSECTION	ms_log	static
LOGMSG_INST_APPENDPARSERULE	ms_log	static
LOGMSG_INST_APPENDTAXONOMY	ms_log	static
LOGMSG_INST_CHANGEDBTAXONOMY	ms_log	static
LOGMSG_INST_CHANGEPARSERULE	ms_log	static
LOGMSG_INST_CHANGEPERCOLATORFEATS	ms_log	static
LOGMSG_INST_CHANGEPERCOLATORUSERT	ms_log	static
LOGMSG_INST_CHANGEPROTFAMILYSWITCH	ms_log	static
LOGMSG_INST_CHANGERESULTSCACHE	ms_log	static
LOGMSG_INST_CHANGESPLITDATAFILESIZE	ms_log	static
LOGMSG_INST_CHANGESPLITNUMOFQUERIES	ms_log	static
LOGMSG_INST_CLUSTERSECTION	ms_log	static
LOGMSG_INST_FAILSAVEPOSTINSTALLFILE	ms_log	static
LOGMSG_INST_LOGICALPERPHYSICALCPU	ms_log	static
LOGMSG_INST_MASCOTDATOK	ms_log	static
LOGMSG_INST_NOSUBCLUSTERSET	ms_log	static
LOGMSG_INST_NOTMASCOTDATOK	ms_log	static
LOGMSG_INST_NUMTHREADS	ms_log	static
LOGMSG_INST_REMOVEOPTIONSSECTION	ms_log	static
LOGMSG_INST_SAVEDPOSTINSTALLFILE	ms_log	static
LOGMSG_INST_SETOPTIONSSECTION	ms_log	static
LOGMSG_MATRIX_OUTPUT_VALS	ms_log	static
LOGMSG_MSR2DAT28_SQL_TRACING	ms_log	static
LOGMSG_NON_DEFAULT_HOMOLOGY_THRESHOLD	ms_log	static
LOGMSG_PEPSUM_GETHIT	ms_log	static
LOGMSG_PROTINFER_CHOOSE_NEXT_KEEP	ms_log	static
LOGMSG_PROTINFER_CHOOSE_NEXT_START	ms_log	static
LOGMSG_PROTINFER_CHOOSE_NEXT_SUPERSET_EMPTY	ms_log	static
LOGMSG_PROTINFER_CHOOSE_NEXT_SUPERSET_LIST	ms_log	static
LOGMSG_PROTINFER_CLUSTER_FROM_ACC	ms_log	static
LOGMSG_PROTINFER_ELIMINATE_INTERSECTIONS_FREE_COUNT_ZERO	ms_log	static
LOGMSG_PROTINFER_ELIMINATE_INTERSECTIONS_NEXT	ms_log	static
LOGMSG_PROTINFER_ELIMINATE_INTERSECTIONS_SUPERSET_LIST	ms_log	static
LOGMSG_PROTINFER_FIND_FAMILY_END	ms_log	static
LOGMSG_PROTINFER_FIND_FAMILY_QUEUE	ms_log	static
LOGMSG_PROTINFER_FIND_FAMILY_REP_SEQS	ms_log	static
LOGMSG_PROTINFER_FIND_FAMILY_START	ms_log	static
LOGMSG_PROTINFER_FIND_MATCHES_PROTEIN_END	ms_log	static
LOGMSG_PROTINFER_FIND_MATCHES_PROTEIN_START	ms_log	static
LOGMSG_PROTINFER_FIND_MATCHES_SUBSET_START	ms_log	static
LOGMSG_PROTINFER_GROUP_FAMILY_DISCARDED_SL_LIST	ms_log	static
LOGMSG_PROTINFER_GROUP_FAMILY_ELIMINATION	ms_log	static
LOGMSG_PROTINFER_GROUP_FAMILY_ELIMINATION_LEAD_LIST	ms_log	static
LOGMSG_PROTINFER_GROUP_FAMILY_ELIMINATION_MEMBER_LIST	ms_log	static
LOGMSG_PROTINFER_GROUP_FAMILY_ELIMINATION_SUBSET_LIST	ms_log	static
LOGMSG_PROTINFER_GROUP_FAMILY_PULL_IN	ms_log	static
LOGMSG_PROTINFER_GROUP_FAMILY_SAMESET_LEAD_LIST	ms_log	static
LOGMSG_PROTINFER_GROUP_FAMILY_SAMESET_PARENT_LIST	ms_log	static
LOGMSG_PROTINFER_GROUP_FAMILY_START	ms_log	static
LOGMSG_PROTINFER_GROUP_FROM_ACC	ms_log	static
LOGMSG_PROTINFER_NUM_PEPTIDES_IN_FAMILY	ms_log	static
LOGMSG_PROTINFER_PEPTIDE_MATRIX	ms_log	static
LOGMSG_PROTINFER_REMOVE_CONFLICTING_DISCARD	ms_log	static
LOGMSG_PROTINFER_REMOVE_CONFLICTING_KEEP	ms_log	static
LOGMSG_PROTINFER_REMOVE_CONFLICTING_START	ms_log	static
LOGMSG_PROTINFER_SINGLETON_FROM_ACC	ms_log	static
LOGMSG_PROTINFER_SORT_BY_SCORE_CREATE	ms_log	static
LOGMSG_PROTINFER_SORT_BY_SCORE_CREATED	ms_log	static
LOGMSG_PROTINFER_SORT_BY_SCORE_DONE	ms_log	static
LOGMSG_PROTINFER_SORT_BY_SCORE_NEXT_PROTEIN	ms_log	static
LOGMSG_PROTINFER_SORT_BY_SCORE_NO_PROTEINS	ms_log	static
LOGMSG_PROTINFER_SORT_BY_SCORE_REMOVE_CHECKBOLD	ms_log	static
LOGMSG_PROTINFER_SORT_BY_SCORE_REMOVE_LONGESTPEPLEN	ms_log	static
LOGMSG_PROTINFER_SORT_BY_SCORE_REMOVE_LONGESTSIGPEPLEN	ms_log	static
LOGMSG_PROTINFER_SORT_BY_SCORE_REMOVE_MAXHITS	ms_log	static
LOGMSG_PROTINFER_SORT_BY_SCORE_REMOVE_MINPROTEINSCORE	ms_log	static
LOGMSG_PROTINFER_SORT_BY_SCORE_START	ms_log	static
LOGMSG_PROTINFER_SUBSET_STARTS_NEW_HIT	ms_log	static
LOGMSG_QUANT_ADDED_PROTEIN_HIT	ms_log	static
LOGMSG_QUANT_ADDING_PROTEIN_HIT	ms_log	static
LOGMSG_QUANT_CALC_COMPLETE_ON_MERGED	ms_log	static
LOGMSG_QUANT_CLOSING_CACHE_FILE	ms_log	static
LOGMSG_QUANT_EXCLUDING_PEPTIDE	ms_log	static
LOGMSG_QUANT_EXCLUDING_PEPTIDE_GREATHAN	ms_log	static
LOGMSG_QUANT_EXCLUDING_PEPTIDE_LESSTHAN	ms_log	static
LOGMSG_QUANT_FINISH_CALC_COMPLETE	ms_log	static
LOGMSG_QUANT_FINISH_LOAD_CDB	ms_log	static
LOGMSG_QUANT_FINISH_REORDER_AFTER_MERGE	ms_log	static
LOGMSG_QUANT_FINISH_UPDATE_PROT_MATCHES	ms_log	static
LOGMSG_QUANT_HELPER_TEST_REQUIRED	ms_log	static
LOGMSG_QUANT_LOAD_PEP_STATUS_MATCHES	ms_log	static
LOGMSG_QUANT_LOADING_MATCHES	ms_log	static
LOGMSG_QUANT_MERGE_COMPONENT_DUPE_FI	ms_log	static
LOGMSG_QUANT_MERGE_COMPONENT_INCONSIST	ms_log	static
LOGMSG_QUANT_MERGE_COMPONENT_SUCCESS	ms_log	static
LOGMSG_QUANT_OPENING_CACHE_FILE	ms_log	static
LOGMSG_QUANT_REAPPLY_THRESHOLDS	ms_log	static
LOGMSG_QUANT_REMATCHING_INFERRED	ms_log	static
LOGMSG_QUANT_REMOVE_INFERRED_MATCH	ms_log	static
LOGMSG_QUANT_REMOVE_MATCH_NO_EVIDENCE	ms_log	static
LOGMSG_QUANT_RT_OFFSET_LOOKUP	ms_log	static
LOGMSG_QUANT_START_CALC_COMPLETE	ms_log	static
LOGMSG_QUANT_START_LOAD_CDB	ms_log	static
LOGMSG_QUANT_START_REORDER_AFTER_MERGE	ms_log	static
LOGMSG_QUANT_START_UPDATE_PROT_MATCHES	ms_log	static
LOGMSG_QUANT_TIME_ALIGN_INDEX_MZ_RANGE	ms_log	static
LOGMSG_QUANT_TIME_ALIGN_INDEX_MZ_RANGE1	ms_log	static
LOGMSG_QUANT_UPDATE_EXCLUDED_MATCHES	ms_log	static
LOGMSG_QUANT_UPDATING_PEP_EVIDENCE	ms_log	static
LOGMSG_REPORT_FUNCTION_CALLED_BY	ms_log	static
LOGMSG_REPORT_FUNCTION_ENTRY	ms_log	static
LOGMSG_REPORT_FUNCTION_ENTRY_WITH_ARGS1	ms_log	static
LOGMSG_REPORT_FUNCTION_ENTRY_WITH_ARGS2	ms_log	static
LOGMSG_REPORT_FUNCTION_ENTRY_WITH_ARGS3	ms_log	static
LOGMSG_REPORT_FUNCTION_ENTRY_WITH_ARGS4	ms_log	static
LOGMSG_REPORT_FUNCTION_EXIT	ms_log	static
LOGMSG_REPORT_FUNCTION_EXIT_WITH	ms_log	static
LOGMSG_RESFILE_APPEND	ms_log	static
ms_log()	ms_log
msg_num_t typedef	ms_log
msg_sev enum name	ms_log
sev_debug1 enum value	ms_log
sev_debug2 enum value	ms_log
sev_debug3 enum value	ms_log
sev_fatal enum value	ms_log
sev_info enum value	ms_log
sev_warn enum value	ms_log
willMessageBeLogged(const msg_num_t msgNum) const	ms_log
~ms_log()	ms_log	virtual