Matrix Science Mascot Parser toolkit
 
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ms_masses Member List

This is the complete list of members for ms_masses, including all inherited members.

appendErrors(const ms_errors &src)ms_errors
applyFixedMods(const ms_modvector *mods, ms_errs *err)ms_masses
applyIsotopes(const ms_umod_configfile *umodFile, const ms_quant_component *quantComp)ms_masses
clearAllErrors()ms_errors
copyFrom(const ms_masses *right)ms_masses
copyFrom(const ms_umod_configfile *right, bool addMissingResidueMasses=true)ms_masses
matrix_science::ms_errors::copyFrom(const ms_errors *right)ms_errors
defaultValues(bool useDefaultResidueMasses=true)ms_masses
getCarbonMass(const matrix_science::MASS_TYPE massType) constms_masses
getConnectionSettings() constms_masses
getCtermDelta(const matrix_science::MASS_TYPE massType) constms_masses
getCterminalMass(const matrix_science::MASS_TYPE massType) constms_masses
getCtermNeutralLoss(const matrix_science::MASS_TYPE massType) constms_masses
getElectronMass() constms_masses
getErrorHandler() constms_errors
getFileName() constms_masses
getFragResidueMass(const matrix_science::MASS_TYPE massType, const char residue) constms_masses
getHydrogenMass(const matrix_science::MASS_TYPE massType) constms_masses
getLastError() constms_errors
getLastErrorString() constms_errors
getNitrogenMass(const matrix_science::MASS_TYPE massType) constms_masses
getNtermDelta(const matrix_science::MASS_TYPE massType) constms_masses
getNterminalMass(const matrix_science::MASS_TYPE massType) constms_masses
getNtermNeutralLoss(const matrix_science::MASS_TYPE massType) constms_masses
getOxygenMass(const matrix_science::MASS_TYPE massType) constms_masses
getResidueMass(const matrix_science::MASS_TYPE massType, const char residue) constms_masses
isResidueModified(const char residue) constms_masses
isSame(const ms_masses &other, const MASS_TYPE massType) constms_masses
isValid() constms_errors
ms_errors()ms_errors
ms_masses()ms_masses
ms_masses(const ms_masses &src)ms_masses
ms_masses(const ms_umod_configfile &src, bool addMissingResidueMasses=true)ms_masses
ms_masses(const ms_umod_configfile &src, const ms_quant_component &quantComp)ms_masses
ms_masses(const char *filename, const matrix_science::ms_connection_settings *cs=0)ms_masses
operator=(const ms_masses &right)ms_masses
read_file()ms_masses
save_file()ms_masses
saveToString(std::string &modfileAsStr)ms_masses
setCarbonMass(const double massMono, const double massAve)ms_masses
setConnectionSettings(const matrix_science::ms_connection_settings &cs)ms_masses
setCtermModification(const double monoDelta, const double aveDelta, const double monoNeutralLoss=0.0, const double aveNeutralLoss=0.0)ms_masses
setElectronMass(const double mass)ms_masses
setFileName(const char *name)ms_masses
setHydrogenMass(const double massMono, const double massAve)ms_masses
setNitrogenMass(const double massMono, const double massAve)ms_masses
setNtermModification(const double monoDelta, const double aveDelta, const double monoNeutralLoss=0.0, const double aveNeutralLoss=0.0)ms_masses
setOxygenMass(const double massMono, const double massAve)ms_masses
setResidueMasses(const char residue, const double massMono, const double massAve)ms_masses
setResidueModification(const double monoDelta, const double aveDelta, const double monoNeutralLoss, const double aveNeutralLoss, const char *residues)ms_masses
~ms_errors()ms_errors
~ms_masses()ms_masses