appendErrors(const ms_errors &src) | ms_errors | |
calculateFromConsensuValues(bool replaceExisting=false) | ms_ms1quant_time_align | |
clearAllErrors() | ms_errors | |
copyFrom(const ms_errors *right) | ms_errors | |
featureWidths_t typedef | ms_ms1quant_time_align | |
fractionToSubProject_t typedef | ms_ms1quant_time_align | |
getAlgorithmName() const | ms_ms1quant_time_align | |
getBinSize() const | ms_ms1quant_time_align | |
getCombinedLimits(const int fractionNum) | ms_ms1quant_time_align | |
getCombinedLimits(const int fractionNum) const | ms_ms1quant_time_align | |
getErrorHandler() const | ms_errors | |
getEstimatedFeatureWidth(const int subProjectId, const double mOverZ, const double rt) const | ms_ms1quant_time_align | |
getEvaluation(const int subProject, double &meanErrorsRaw, double &meanErrorsAligned, double &stdevErrorsRaw, double &stdevErrorsAligned, double &pearsonCoefficientRaw, double &pearsonCoefficientAligned) | ms_ms1quant_time_align | |
getFeatureWidths() const | ms_ms1quant_time_align | |
getFinalResults() | ms_ms1quant_time_align | |
getFinalResults() const | ms_ms1quant_time_align | |
getFractionToSubProjectMap() const | ms_ms1quant_time_align | |
getLastError() const | ms_errors | |
getLastErrorString() const | ms_errors | |
getRToffset(const int myProjectId, const int otherProjectId, const double rtInOtherProject, const double mOverZ) const | ms_ms1quant_time_align | |
getShiftsFromConsensus() const | ms_ms1quant_time_align | |
getShiftsToConsensus() const | ms_ms1quant_time_align | |
getStatus(void) const | ms_ms1quant_time_align | |
getStatusAsText(void) const | ms_ms1quant_time_align | |
getSubProjectToFractionMap() const | ms_ms1quant_time_align | |
isValid() const | ms_errors | |
loadXmlFile(const std::string &xmlFilename, const std::string &schemaDirectory) | ms_ms1quant_time_align | |
ms_errors() | ms_errors | |
ms_ms1quant_time_align(const int binSize=12) | ms_ms1quant_time_align | |
ms_ms1quant_time_align(const ms_ms1quant_time_align_body &body) | ms_ms1quant_time_align | |
saveXmlFile(const std::string &xmlFilename, const std::string &schemaDirectory) const | ms_ms1quant_time_align | |
setAlgorithmName(const char *algorithmName) | ms_ms1quant_time_align | |
setAverageFeatureWidths(const std::vector< double > &featureWidths) | ms_ms1quant_time_align | |
setEvaluation(int subProject, double meanErrorsRaw, double meanErrorsAligned, double stdevErrorsRaw, double stdevErrorsAligned, double pearsonCoefficientRaw, double pearsonCoefficientAligned) | ms_ms1quant_time_align | protected |
ST_TA_CALCULATED enum value | ms_ms1quant_time_align | |
ST_TA_LOADED_FROM_CDB enum value | ms_ms1quant_time_align | |
ST_TA_LOADED_FROM_XML enum value | ms_ms1quant_time_align | |
ST_TA_NO_DATA enum value | ms_ms1quant_time_align | |
status_t enum name | ms_ms1quant_time_align | |
~ms_errors() | ms_errors | |