Matrix Science Mascot Parser toolkit
 
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ms_quant_helper Member List

This is the complete list of members for ms_quant_helper, including all inherited members.

appendErrors(const ms_errors &src)ms_errors
clearAllErrors()ms_errors
copyFrom(const ms_errors *right)ms_errors
createMissingComponents(matrix_science::ms_ms1quant_match *match) constms_quant_helper
getErrorHandler() constms_errors
getFraction(const int file_index) constms_quant_helper
getLastError() constms_errors
getLastErrorString() constms_errors
isPeptideQualityOK(int q, int p, std::string &reasonStrRef) constms_quant_helper
isPeptideQuantifiable(int q, int p, const ms_protein *protein, int peptideIndex, std::string &reasonStrRef) constms_quant_helper
isValid() constms_errors
ms_errors()ms_errors
ms_quant_helper(const ms_peptidesummary &pepsum, const ms_quant_method &qm, const ms_umod_configfile &umodfile, const int file_index=ms_quant_file_index::file_index_value_not_set)ms_quant_helper
PEPTIDE_CHARGE_BELOW_PRECURSOR_MIN enum valuems_quant_helper
PEPTIDE_EXPECT_ABOVE_THRESHOLD enum valuems_quant_helper
PEPTIDE_HAS_EXCLUDED_FIXEDMOD enum valuems_quant_helper
PEPTIDE_HAS_EXCLUDED_LOCAL_FIXEDMOD enum valuems_quant_helper
PEPTIDE_HAS_EXCLUDED_LOCAL_VARMOD enum valuems_quant_helper
PEPTIDE_HAS_EXCLUDED_VARMOD enum valuems_quant_helper
PEPTIDE_HAS_NO_EXCLUSIVE_MODS enum valuems_quant_helper
PEPTIDE_HAS_NO_REQUIRED_FIXEDMOD enum valuems_quant_helper
PEPTIDE_HAS_NO_REQUIRED_VARMOD enum valuems_quant_helper
PEPTIDE_HAS_UNMODIFIED_SITE enum valuems_quant_helper
PEPTIDE_IS_QUANTIFIABLE enum valuems_quant_helper
PEPTIDE_NOT_UNIQUE enum valuems_quant_helper
PEPTIDE_QUALITY enum namems_quant_helper
PEPTIDE_QUALITY_IS_OK enum valuems_quant_helper
PEPTIDE_QUALITY_UNAVAILABLE enum valuems_quant_helper
PEPTIDE_QUANTIFIABILITY enum namems_quant_helper
PEPTIDE_QUANTIFIABILITY_UNAVAILABLE enum valuems_quant_helper
PEPTIDE_SCORE_BELOW_HOMOLOGY_THR enum valuems_quant_helper
PEPTIDE_SCORE_BELOW_IDENTITY_THR enum valuems_quant_helper
PEPTIDE_SCORE_BELOW_IDENTITY_THR_NOHOM enum valuems_quant_helper
PEPTIDE_SCORE_BELOW_SCORE_THR enum valuems_quant_helper
~ms_errors()ms_errors
~ms_quant_helper()ms_quant_helper