ms_quant_integration.hpp

/*
##############################################################################
# file: ms_quant_integration.hpp                                             #
# 'msparser' toolkit                                                         #
# Encapsulates integration-element from "quantitation.xml"-file              #
##############################################################################
# COPYRIGHT NOTICE                                                           #
# Copyright 1998-2006 Matrix Science Limited  All Rights Reserved.           #
#                                                                            #
##############################################################################
 * @(#)$Source: parser/inc/ms_quant_integration.hpp $
 * @(#)$Revision: 1b450440f9c97e1e41d0fc6016a27d68951d4532 | MSPARSER_REL_3_0_0-2024-09-24-0-g93ebaeb4f4 $
 * @(#)$Date: 2018-07-30 16:23:53 +0100 $
##############################################################################
 */
 
#ifndef MS_QUANT_INTEGRATION_HPP
#define MS_QUANT_INTEGRATION_HPP
 
 
#include <string>
#include <vector>
 
// forward declarations
namespace msparser_internal {
    class ms_quant_xmlloader;
    class ms_quant_integration_impl;
}
 
 
namespace matrix_science {
 
    class ms_xml_schema; // forward declaration
 
 
    class MS_MASCOTRESFILE_API ms_quant_integration: public ms_quant_parameters
    {
        friend class msparser_internal::ms_quant_xmlloader;
    public:
        ms_quant_integration();
 
        ms_quant_integration(const ms_quant_integration& src);
 
        virtual ~ms_quant_integration();
 
        void defaultValues();
 
        void copyFrom(const ms_quant_integration* right);
 
#ifndef SWIG
        ms_quant_integration& operator=(const ms_quant_integration& right);
#endif
        virtual std::string getSchemaType() const;
 
        virtual std::string validateShallow(const ms_xml_schema *pSchemaFileObj) const;
 
        virtual std::string validateDeep(const ms_xml_schema *pSchemaFileObj) const;
 
 
        bool haveMethod() const;
 
        std::string getMethod() const;
 
        void setMethod(const char* value);
 
        void dropMethod();
 
        std::string getMethodSchemaType() const;
 
 
        bool haveSource() const;
 
        std::string getSource() const;
 
        void setSource(const char* value);
 
        void dropSource();
 
        std::string getSourceSchemaType() const;
 
 
        bool haveMassDelta() const;
 
        std::string getMassDelta() const;
 
        void setMassDelta(const char* value);
 
        void dropMassDelta();
 
        std::string getMassDeltaSchemaType() const;
 
 
        bool haveMassDeltaUnit() const;
 
        std::string getMassDeltaUnit() const;
 
        void setMassDeltaUnit(const char* value);
 
        void dropMassDeltaUnit();
 
        std::string getMassDeltaUnitSchemaType() const;
 
 
        bool haveElutionTimeDelta() const;
 
        std::string getElutionTimeDelta() const;
 
        void setElutionTimeDelta(const char* value);
 
        void dropElutionTimeDelta();
 
        std::string getElutionTimeDeltaSchemaType() const;
 
 
        bool haveElutionTimeDeltaUnit() const;
 
        std::string getElutionTimeDeltaUnit() const;
 
        void setElutionTimeDeltaUnit(const char* value);
 
        void dropElutionTimeDeltaUnit();
 
        std::string getElutionTimeDeltaUnitSchemaType() const;
 
 
        bool haveElutionProfileCorrelationThreshold() const;
 
        std::string getElutionProfileCorrelationThreshold() const;
 
        void setElutionProfileCorrelationThreshold(const char* value);
 
        void dropElutionProfileCorrelationThreshold();
 
        std::string getElutionProfileCorrelationThresholdSchemaType() const;
 
 
        bool haveProcessingOptions() const;
 
        std::string getProcessingOptions() const;
 
        void setProcessingOptions(const std::string value);
 
        void dropProcessingOptions();
 
        std::string getProcessingOptionsSchemaType() const;
 
 
        bool havePrecursorRange() const;
 
        std::string getPrecursorRange() const;
 
        void setPrecursorRange(const char* value);
 
        void dropPrecursorRange();
 
        std::string getPrecursorRangeSchemaType() const;
 
 
        bool haveMatchedRho() const;
 
        std::string getMatchedRho() const;
 
        void setMatchedRho(const char * value);
 
        void dropMatchedRho();
 
        std::string getMatchedRhoSchemaType() const;
 
 
        bool haveXicThreshold() const;
 
        std::string getXicThreshold() const;
 
        void setXicThreshold(const char * value);
 
        void dropXicThreshold();
 
        std::string getXicThresholdSchemaType() const;
 
 
        bool haveXicMaxWidth() const;
 
        int getXicMaxWidth() const;
 
        void setXicMaxWidth(int value);
 
        void dropXicMaxWidth();
 
        std::string getXicMaxWidthSchemaType() const;
 
 
        bool haveXicSmoothing() const;
 
        int getXicSmoothing() const;
 
        void setXicSmoothing(int value);
 
        void dropXicSmoothing();
 
        std::string getXicSmoothingSchemaType() const;
 
 
        bool haveAllChargeStates() const;
 
        bool isAllChargeStates() const;
 
        void setAllChargeStates(const bool value);
 
        void dropAllChargeStates();
 
        std::string getAllChargeStatesSchemaType() const;
 
 
        bool haveSimpleRatio() const;
 
        bool isSimpleRatio() const;
 
        void setSimpleRatio(const bool value);
 
        void dropSimpleRatio();
 
        std::string getSimpleRatioSchemaType() const;
 
 
        bool haveAllChargeStatesThreshold() const;
 
        std::string getAllChargeStatesThreshold() const;
 
        void setAllChargeStatesThreshold(const char * value);
 
        void dropAllChargeStatesThreshold();
 
        std::string getAllChargeStatesThresholdSchemaType() const;
 
 
        bool haveAllowElutionShift() const;
 
        bool isAllowElutionShift() const;
 
        void setAllowElutionShift(const bool value);
 
        void dropAllowElutionShift();
 
        std::string getAllowElutionShiftSchemaType() const;
 
    private:
        msparser_internal::ms_quant_integration_impl *m_pImpl;
    }; // class ms_quant_integration
 // end of config_group
 
} // namespace matrix_science
 
#endif // MS_QUANT_INTEGRATION_HPP
 
/*------------------------------- End of File -------------------------------*/