If your computer breaks down, do you know how to restore Mascot? As long as you regularly back up the right directories and files, it's straightfoward and fully described in the online help: https://lnkd.in/eqikT9DZ #proteomics #MassSpec
About us
Matrix Science develops and markets software products which integrate mass spectrometry into bioinformatics. Our interests extend to all aspects of mass spectrometry in the life sciences. Please contact us to discuss: * Developing new applications * Consultancy in mass spectrometry and bioinformatics * Systems analysis and integration Mascot: The trusted reference standard for protein identification by mass spectrometry for 25 years
- Website
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https://www.matrixscience.com/
External link for Matrix Science
- Industry
- Biotechnology Research
- Company size
- 2-10 employees
- Headquarters
- London
- Type
- Privately Held
- Founded
- 1998
Locations
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Primary
Get directions
64 Baker St
London, W1U 7GB, GB
Employees at Matrix Science
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Martin Stuart
Infrastructure Developer at Bloomberg LP
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Alex Day
Software Developer | Python, C# & C++ | Passionate About Solving Complex Problems
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Adam Weremczuk
Systems Administrator at Matrix Science
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Laura Shea
Manager, Questionnaires at Contract Testing Inc. | Competitive Intelligence, Quality Research and Analysis, Sensory and Marketing Consulting
Updates
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Mascot Newsletter, March 2025: 50% more identifications in Thermo Proteome Discoverer. Maternal immune activation imprints translational dysregulation (Pedro R. Cutillas, Juan F Lopez Gimenez). Mascot's ML adapter framework (US HUPO 2025 poster). #proteomics #MassSpec https://lnkd.in/eFua9KvS
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Mascot Distiller provides DDA LFQ for Bruker, Sciex, Thermo and Waters instruments. Retention time alignment ("match between runs"); ion mobility (Bruker TIMS); fractionation; optimised peak detection; visualisation; and more. #proteomics #MassSpec https://lnkd.in/esjAb3V9
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Mascot Newsletter, February 2025: Mascot vs FragPipe: semi-tryptic TMTpro. Characterization of the noncanonical proteome. Mascot Server 3.1 is now available. #proteomics #MassSpec https://lnkd.in/ekdQp2Ex
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Mascot Distiller can now use machine learning to boost sensitivity of protein quantitation. We processed a Thermo Orbitrap DDA LFQ benchmark data set, where Distiller now quantitates 14% more proteins at 1% FDR. #proteomics #MassSpec https://lnkd.in/efeKadHh
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Do you use Thermo Proteome Discoverer with Mascot Server? Mascot Server 3.1 can now send results refined with machine learning directly to PD. PD 3.1: Identify over 20% more proteins. PD 2.4: Identify over 40% more proteins. #proteomics #MassSpec https://lnkd.in/eZ24MmCU
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Mascot Server 3.1 is a patch release that enhances integration with Thermo Proteome Discoverer and fixes a few important bugs introduced in Mascot Server 3.0. You can now import refined results directly from Mascot into PD. #proteomics #MassSpec https://lnkd.in/em_UEVNn
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Mascot Newsletter, January 2025: Learn how Mascot uses machine learning. Characterising a bacterial microcompartment. Mascot protein inference. https://lnkd.in/eu6kzjER #proteomics #MassSpec
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Mascot Server has a lot of functionality and it's sometimes hard to know where to start. The online help now has a table of example data sets shipped with Mascot, including links to the corresponding help topics. https://lnkd.in/e8iiWNEY #proteomics #MassSpec
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If a peptide has two serines and a single phosphate, site assignment may be ambiguous. Mascot helps by calculating a site localisation confidence, where the assignment with more MS/MS evidence gets higher confidence. https://lnkd.in/eMZeAAda #proteomics #MassSpec