ms_unigene Class Reference

This class encapsulates a complete unigene file. More...

#include <ms_unigene.hpp>

Inherited by ms_unigene_dat.

Collaboration diagram for ms_unigene:

Public Member Functions
	ms_unigene (const ms_mascotresfilebase &resfile, const char *filename)
	The constructor for a unigene object.
virtual const ms_unigene_entry *	findEntry (const char *id)=0
	Given an accession, return a pointer to the relevant unigene entry.
virtual std::string	getUnigeneForAccession (const std::string accession, const int index)=0
	Return the Unigene 'accession' (ID) for a given EST accession.

Protected Member Functions
void	addAccessionUnigenePair (const ms_unigene_entry *unigene, const std::string &accession)
	Used internally to create a lookup of gi numbers to a list of accessions.

Detailed Description

This class encapsulates a complete unigene file.

Creating one of these objects reads in the unigene file, creating a number of ms_unigene_entry objects. The gi and EMBL accessions are all indexed.

---

The documentation for this class was generated from the following files:

• ms_unigene.hpp
• ms_unigene.cpp