Matrix Science Mascot Parser toolkit
 
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Mascot utilities and tools module

Modules

 Examples for the Mascot tools module
 
 Spectral library Classes
 

Namespaces

namespace  matrix_science::ms_spectral_lib
 

Classes

class  ms_fileutilities
 This utility class mainly contains static members. More...
 
class  ms_imputation
 
class  ms_imputation_average_value
 
class  ms_imputation_fixed_value
 
class  ms_imputation_knn
 
class  ms_imputation_method
 
class  ms_imputation_missforest
 
class  ms_imputation_peptide_data
 
class  ms_matrix
 A two-dimensional matrix of numbers. More...
 
class  ms_spectral_lib_entry
 This class is used to encapsulate a single entry, i.e. single spectrum from a NIST .msp file or SpectraST .sptxt file. More...
 
class  ms_spectral_lib_file
 This class is used to encapsulate a complete NIST .msp, SpectraST .sptxt or X!Hunter ASL MGF file. More...
 
class  ms_spectral_lib_peak
 This class is used to encapsulate a single fragment ion in a NIST .msp or a SpectraST .sptxt file. More...
 
class  ms_spectral_lib_peak_list
 This class is used to encapsulate a peak list from a single spectrum in a NIST .msp or a SpectraST .sptxt file. More...
 
class  ms_tinycdb
 Wrapper for the public domain tinycdb package http://www.corpit.ru/mjt/tinycdb.html by Michael Tokarev. More...
 
class  ms_treecluster
 This class is an interface to the cluster algorithm described at http://bonsai.hgc.jp/~mdehoon/software/cluster/. More...
 
class  ms_zip
 Utility class for compressing and decompressing data in compress format, and compressing in gzip format. More...
 

Detailed Description

Tools for creating CDB files, zipping files, file manipulation and clustering