matrix_science::ms_spectral_lib Namespace Reference

Enumerations
enum	FILE_FORMAT {   FORMAT_UNKNOWN ,   FORMAT_NIST_MSP ,   FORMAT_SPECTRAST ,   FORMAT_MGF ,   FORMAT_XHUNTER }

Detailed Description

The ms_spectral_lib namespace currently just contains one enum used for the ms_spectral_lib_xxx classes

Enumeration Type Documentation

FILE_FORMAT

enum FILE_FORMAT

See Using enumerated values and static const ints in Perl, Java, Python and C#.

Spectral libraries are available in a number of formats. All the formats obviously have m/z and intensity and intensity pairs, but there are different annotation formats, and different header formats.

Enumerator
FORMAT_UNKNOWN	Unknown format.
FORMAT_NIST_MSP	NIST MSP formt.
FORMAT_SPECTRAST	Institute for Systems Biology (ISB) SpectraST format.
FORMAT_MGF	Mascot Generic Format. Only suitable for output.
FORMAT_XHUNTER	X!HUNTER ASL MGF file format (2007.06.01)