Blog
Articles tagged: Proteome Discoverer
Using machine learning with Mascot and Proteome Discoverer
Mascot Server 3.1 is a patch release that enhances integration with Thermo Proteome Discoverer™ and fixes a few important bugs introduced in Mascot Server 3.0. The full list of improvements and changes is in the release announcement. The Proteome Discoverer integration is particularly noteworthy, as you can now import refined results directly from Mascot into PD. This can easily give [...]
Mascot workflows in Proteome Discoverer
For many users of Thermo instruments, Proteome Discoverer (PD) is their primary user interface for database searching, and Mascot is represented by a node in the workflow. This article collects together a few tips and observations concerning Proteome Discoverer 2.3 and Mascot Server 2.6. Proteome Discoverer Configuration Under Administration; Mascot Server, the setting Max. MGF File Size [MB] has a [...]